| Rising Phoenix Holdings Corporation | Administrative and Support and Waste Management | $3,502,200 | $3,543,171 | 197 | $37.3M |  Research |
| House of the Good Shepherd | Health Care and Social Assistance | $3,263,257 | $3,301,790 | 380 | N/A | Research |
| Trenton Technology, Inc. | Manufacturing | $2,424,700 | $2,455,789 | 255 | $66.8M | Research |
| Human Technologies Corporation | Health Care and Social Assistance | $2,233,500 | $2,258,833 | 310 | $50.2M | Research |
| Deiorio Foods INC | Manufacturing | $1,917,688 | $1,939,439 | 190 | $67.1M | Research |
| Deiorio Foods INC | Manufacturing | $1,883,825 | $1,896,367 | 165 | $58.2M | Research |
| Central Association for the Blind, Inc. | Health Care and Social Assistance | $1,861,788 | $1,872,079 | 270 | N/A | Research |
| Matt Brewing Co. Inc. | Manufacturing | $1,851,908 | $1,863,273 | 125 | $44.1M | Research |
| Utica General Truck Co., Inc. | Retail Trade | $1,751,069 | $1,768,580 | 127 | $32.0M | Research |
| Upstate Cerebral Palsy Inc. | Health Care and Social Assistance | $1,733,420 | $1,744,770 | 500 | $85.1M | Research |
| Black River Systems Company INC | Professional, Scientific, and Technical Services | $1,721,852 | $0 | 95 | $19.7M | Research |
| The Neighborhood Center, INC | Health Care and Social Assistance | $1,700,000 | $1,720,307 | 202 | N/A | Research |
| Heritage Operating Associates LLC | Health Care and Social Assistance | $1,536,100 | $1,551,629 | 209 | $35.6M | Research |
| Quanterion Solutions Incorporated | Professional, Scientific, and Technical Services | $1,519,800 | $1,534,082 | 95 | $11.7M | Research |
| Kelberman Center,inc. | Educational Services | $1,481,732 | $0 | 255 | N/A | Research |
| Harold T. Clark, LLC | Accommodation and Food Services | $1,481,000 | $1,495,080 | 260 | $46.2M | Research |
| Integrated Community Alternatives Network, Inc. | Health Care and Social Assistance | $1,391,825 | $1,404,180 | 157 | $25.4M | Research |
| R.l.e. Corp. | Accommodation and Food Services | $1,377,500 | $1,390,407 | 126 | $23.5M | Research |
| Munson-Williams-Proctor Arts Institute | Educational Services | $1,373,195 | $1,385,891 | 168 | N/A | Research |
| Central New York Cardiology, P.c. | Health Care and Social Assistance | $1,361,447 | $1,368,758 | 118 | $37.0M | Research |
| Pacemaker Steel and Piping Co. Inc. | Wholesale Trade | $1,178,608 | $1,190,813 | 84 | $25.7M | Research |
| Midway Industrial Supply, Inc. | Wholesale Trade | $1,154,665 | $1,164,219 | 99 | $30.3M | Research |
| Remet Corporation | Wholesale Trade | $1,148,031 | $1,161,367 | 78 | $20.1M | Research |
| Fortus Group Travel INC | Transportation and Warehousing | $1,132,238 | $1,146,849 | 76 | $11.5M | Research |
| Metal Solutions, Inc. | Manufacturing | $1,127,200 | $1,137,916 | 155 | $37.9M | Research |